Dr Marco Ferreira Fernandes
Bioinformatician
PhD supervision
- Hasnain Ahmed
Selected publications
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Open access
Genome-wide association neural networks identify genes linked to family history of Alzheimer's disease
Ghose, U., Sproviero, W., Winchester, L., Amin, N., Zhu, T., Newby, D., Ulm, B. S., Papathanasiou, A., Shi, L., Liu, Q., Fernandes, M., Adams, C., Albukhari, A., Almansouri, M., Choudhry, H., van Duijn, C. & Nevado-Holgado, A., 8 Jan 2025, In: Briefings in Bioinformatics. 26, 1, 10 p., bbae704.Research output: Contribution to journal › Article › peer-review
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Open access
Quantitative proteomics identifies plasma protein alterations that associate with metabolic and thrombotic profile changes after bariatric surgery
Ahmed, H., Fernandes, M. F., Abbas, K., Synowsky, S. A., Shirran, S. L., Ajjan, R. A. & Stewart, A. J., 25 Feb 2025, (E-pub ahead of print) In: Diabetes, Obesity and Metabolism. Early View, 11 p.Research output: Contribution to journal › Article › peer-review
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Interplay of metabolome and gut microbiome in individuals with major depressive disorder vs control individuals
Amin, N., Liu, J., Bonnechere, B., Mahmoudiandehkordi, S., Arnold, M., Batra, R., Chiou, Y. J., Fernandes, M., Ikram, M. A., Kraaij, R., Krumsiek, J., Newby, D., Nho, K., Radjabzadeh, D., Saykin, A. J., Shi, L., Sproviero, W., Winchester, L., Yang, Y. & Nevado-Holgado, A. J. & 3 others, , 7 Jun 2023, In: JAMA Psychiatry. 80, 6, p. 597-609 13 p.Research output: Contribution to journal › Article › peer-review
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Open access
Comparative effect of metformin versus sulfonylureas with dementia and Parkinson's disease risk in US patients over 50 with type 2 diabetes mellitus
Newby, D., Linden, A. B., Fernandes, M., Molero, Y., Winchester, L., Sproviero, W., Ghose, U., Li, Q. S., Launer, L. J., Duijn, C. M. V. & Nevado-Holgado, A. J., 15 Sept 2022, In: BMJ Open Diabetes Research and Care. 10, 5, e003036.Research output: Contribution to journal › Article › peer-review
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Open access
Gene Ontology (GO)-driven inference of candidate proteomic markers associated with muscle atrophy conditions
Stalmach, A., Boehm, I., Fernandes, M., Rutter, A., Skipworth, R. J. E. & Husi, H., 27 Aug 2022, In: Molecules. 27, 17, 5514.Research output: Contribution to journal › Article › peer-review
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Open access
Glycosylated clusterin species facilitate Aβ toxicity in human neurons
Foster, E. M., Fernandes, M., Dangla-Valls, A., Hublitz, P., Pangalos, M., Lovestone, S., Ribe, E. M. & Buckley, N. J., 3 Nov 2022, In: Scientific Reports. 12, 18639.Research output: Contribution to journal › Article › peer-review
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Open access
Validation of UK Biobank data for mental health outcomes: a pilot study using secondary care electronic health records
Li, Z., Kormilitzin, A., Fernandes, M., Vaci, N., Liu, Q., Newby, D., Goodday, S., Smith, T., Nevado-Holgado, A. J. & Winchester, L., Apr 2022, In: International Journal of Medical Informatics. 160, 104704.Research output: Contribution to journal › Article › peer-review
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Open access
High blood pressure and risk of dementia: a two-sample Mendelian randomization study in the UK biobank
Sproviero, W., Winchester, L., Newby, D., Fernandes, M., Shi, L., Goodday, S. M., Prats-Uribe, A., Alhambra, D. P., Buckley, N. J. & Nevado-Holgado, A. J., 15 Apr 2021, In: Biological Psychiatry. 89, 8, p. 817-824 8 p.Research output: Contribution to journal › Article › peer-review
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ORA, FCS, and PT strategies in functional enrichment analysis
Fernandes, M. & Husi, H., 9 Jul 2021, Proteomics data analysis. Cecconi, D. (ed.). New York, NY: Humana Press Inc., p. 163-178 16 p. (Methods in molecular biology; vol. 2361).Research output: Chapter in Book/Report/Conference proceeding › Chapter
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Open access
Identification of diagnostic upper gastrointestinal cancer tissue type‑specific urinary biomarkers
Husi, H., Fernandes, M., Skipworth, R. J., Miller, J., Cronshaw, A. D., Fearon, K. C. H. & Ross, J. A., 2019, In: Biomedical Reports. 10, 3, p. 165-174 10 p.Research output: Contribution to journal › Article › peer-review
